Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs443239 | chr19:42506044 | C/G | 0.000314 | 214 | 11.2 | 17 | 15.1 | KM Plot |
KIRP | rs4447666 | chr20:25743845 | A/G | 1.26E-8 | 212 | 16.43 | 17.47 | 4.73 | KM Plot |
KIRP | rs4481552 | chr8:30095629 | A/G | 6.16E-7 | 211 | 14.8 | 18.98 | 0.07 | KM Plot |
KIRP | rs4491465 | chr15:24529414 | A/C | 0.00011 | 212 | 17.03 | 14.03 | 10.23 | KM Plot |
KIRP | rs4500331 | chr1:95281829 | G/A | 6.55E-7 | 213 | 11.43 | 15.9 | 16.5 | KM Plot |
KIRP | rs4519090 | chr11:22331961 | A/G | 3.22E-6 | 213 | 2.52 | 20.05 | 14.87 | KM Plot |
KIRP | rs4542219 | chr1:95279457 | C/T | 1.71E-7 | 209 | 11.2 | 16.93 | 16.47 | KM Plot |
KIRP | rs45476291 | chr14:59836655 | A/G | 0.000195 | 213 | 14.87 | 19.4 | 11.2 | KM Plot |
KIRP | rs45509595 | chr6:27840926 | T/C | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
KIRP | rs45514195 | chr14:59978372 | G/A | 0.000214 | 212 | 16.43 | 16.53 | 11.2 | KM Plot |
KIRP | rs4560752 | chr8:30111469 | C/T | 3.61E-8 | 209 | 15.33 | 21.35 | 4.88 | KM Plot |
KIRP | rs4570579 | chr11:22326069 | C/T | 3.65E-6 | 210 | 2.52 | 20.27 | 14.87 | KM Plot |
KIRP | rs4572168 | chr11:116555926 | A/G | 1.83E-8 | 214 | 9 | 11.65 | 17 | KM Plot |
KIRP | rs4602717 | chr6:26994606 | A/G | 6.97E-9 | 214 | 17 | 10.73 | 1.73 | KM Plot |
KIRP | rs4607889 | chr1:95281713 | A/G | 6.55E-7 | 213 | 11.43 | 15.9 | 16.5 | KM Plot |